Thursday, August 24, 2006

Neuroengineering3: Interorganizational Collaboration

Issel has created a Google Group / Mailing List called "neuroengineering3" (http://groups.google.com/group/neuroengineering3) for intercollegiate collaboration in the realm of Neuroengineering. Hopefully, this will provide a forum for discussing neuroengineering solutions.

People are welcome to join this group for international collaboration, an exchange of research ideas, or help in solving a particular problem. Neuroengineering3 is a more research-oriented forum.

Neuroengineering2 is for interested Hopkins students.

Neuroengineering is for students who have been funded by the Neuroengineering Training Grant.

8/23/06: Meeting Minutes

The NETI officers had a meeting yesterday, after our student seminar. Here are a few of the things we discussed:

*Collaborations*

Debbie (the Chairperson) suggested that students "shadow" a clinical faculty member. Issel (the Organizational Vice President) is currently working with the leader of the Neurosurgery Interest Group (NSIG) to initiate a "shadowing" program. NSIG usually invites clinical faculty speakers to their meetings. Members of NETI will be alerted of these meetings, and meet more clinical faculty. NETI first years will also be required to "shadow" a clinical faculty member for two weeks, during Developmental Biology if they are taking the Medical School courses, or during Intercession if they are taking the Alternate Track. After that time, they will brainstorm a few engineering ideas to ease particular medical problems, and will be encouraged to develop these ideas as part of their research or propose those ideas to engineering faculty.

Issel has also created a Google Group / Mailing List called "neuroengineering3" (http://groups.google.com/group/neuroengineering3) for intercollegiate collaboration in the realm of Neuroengineering. Hopefully, this will provide a forum for discussing neuroengineering solutions.



*Budget*

Misti (the Financial Vice President) will get a list of our budget and email a list of our expenditures to neuroengineering@gmail.com Emails to the GoogleGroups have been sent to neuroengineering@gmail.com, which we will use as a searchable archive of information. Progress reports, ideas, and emails should be cc'd to this address in order to keep a record of NETI information.

Other ideas for funding include:

  • A symposium, either Hopkins-based or intercollegiate
  • Continuing the summer seminar into the school year, with refreshments
  • A gathering in February or March, once the new students have joined the training grant,in order to get to know each other and encourage collaboration.
  • Conferences, especially having all members of NETI go together
  • T-shirts





*Fall Seminar*

For the fall seminar, we would like to invite faculty for "chalk talks" -- quick overviews of their research that also mention possible rotation projects for interested students. Once all of the faculty of the Neuroengineering Training Grant have introduced the students to their research, we will schedule laboratory tours. After that, we will invite faculty speakers from other areas of interest, such as pharmacology or genetics, in order to spur collaborative interest. We will also invite previous trainees and/or alumni to speak at the seminar.

We would also like to collaborate with NSIG and other neuro-based groups at Hopkins to encourage an exchange of information between departments. NSIG invites clinical faculty to speak at their meetings.



*Website*

Andrew Cassidy and Issel Lim are categorizing the content on the website (http://neuroengineering.bme.jhu.edu) to make it more user-friendly. We have already added journals and conferences to the Resources page, and would like to add a list of grants or other funding opportunities. We will be editing the home page, putting the faculty research information with the faculty contact information, categorizing the research focuses, and proposing training opportunities for the new trainees (e.g., microscope training, workshops, research compliance tests, and coursework requirements from the PhD handbook). We will also add a section for "Previous Trainees" on the Students page, and another section for "Alumni."



*Formal Elections*

After the new trainees are selected, we will hold formal elections within the group. The current positions are: Chairman, Organizational Vice President, Financial Vice President, Secretary/Historian, Treasurer, Webmaster. We would also like to include an Outreach Coordinator that will focus specifically on collaborations and publicizing NETI events.

--
Quite a few new students came to the seminar, and we answered a lot of their coursework and labwork questions. We will also be talking to them at the Neuroengineering Reception on Friday.

Please let me know if you have any questions, suggestions, or ideas. Thank you very much!

Wednesday, August 16, 2006

Q: Access to the Gym

How do I get access to the gym?

To get access to the Homewood gym (the "Ralph O'Connor Rec Center"), you first have to ask Hong to email the Homewood gym people a list of all of the students. Then, you just go to the office; they've got office hours on the website. (http://www.jhu.edu/~recsport/). They check your name off the list, take your picture, and give you a gym ID card.

It should be free -- BME grad students get access to gyms on Homewood and on the med campus. You shouldn't need a J-card; most BME grad students don't have one. I do have one, but I was initially going to use it for parking. Our medical school ID badges get us into the Eisenhower Library.

You should also drop by the Cooley Center to pick up a gym card for the medical campus -- that's a little tag w/ a barcode, which you get after filling out a form. The Cooley Center also has a website:
http://www.jhucooleycenter.com/

IM Indoor Soccer is at Cooley, whereas IM Basketball is at Homewood.

Q: Alternate Track / Medical School Classes

Hey there
Sorry for bothering you. I am a first year student. I have one quick question on course selection...
If I choose an alternative track curriculum, can I still take two of the medical school's courses? I only have interest in Molecules and Cells, and Neuroscience.
Is there anybody who has also done this way before? Just chose one or two course of SOM ?
Thanks!


One of the things that you need to consider is when the courses will meet. The medical school classes are taught in blocks -- so for Molecules and Cells, you'll start with one subject (e.g., Biochemistry). You'll have 3-5 lectures a day, starting at 8:00a and usually ending at 1:00p. Then, after about two weeks, you'll finish with Biochemistry, take the final, and move on to another class (for example, Genetics), which is also taught from 8:00a to 1:00p each day. The entire Molecules and Cells block ends around mid-October. However, when you're registering for the Alternate Track fall semester classes, you'll need to choose classes that meet after 1:00p. Vasudev Bailey (baileyv at jhu dot edu) took the alternate course, with Molecules and Cells last year, so you can email him and ask him for advice.

Some people in my year, like Hailiang Huang (hlhuang at jhmi dot edu) also took only the a few med school courses, so you can email him and ask what he did. Others took Neuroscience and Cognition, which is a yearlong graduate student course that covers the same material as the medical school Neuroscience course. Last year, the people taking Neuroscience in the Alternate Track took the laboratory component of the medical school class. Misti Marr (mmarr1 at jhmi dot edu) did that, and she could probably answer your questions.

In short, you can take whichever courses you want. You just have to make sure that there are no time conflicts, and that you fulfill all of your biology and engineering credits. The PhD requirements can be found in the PhD Handbook:
http://www.bme.jhu.edu/academics/phd/phdstudhandbook/coursework.htm

I hope that helps! :)

Monday, August 14, 2006

Q: Classes / Locations / Books

i did not get a registration packet but i filled out a couple of forms (i believe one of them was green) that hong gave me so i think i'm registered (i hope). when does the neuroengineering seminar meet? oh, speaking of which, how do we find out where our classes are meeting (i can't find room locations for any of my classes at all), and how do we find out what books we'll be needing?

1. Other people been asking a few questions about registration/classes, too, so I posted another entry about that, along w/ comments from other graduate students, on the neuroengineering blog. The particular entry is:
http://neuroengineering.blogspot.com/2006/08/q-classes-registration.html

2. For Homewood classes, you can call the registrar's office/check the website. Homewood classes usually include engineering classes, though sometimes the BME classes are taught through the School of Medicine. (It depends on the professor's preference.) For Homewood classes, also, you can usually check the status of your registration using the Online Services via JHU Registrar. The link to that is:
http://www.jhu.edu/~registr/online.html

For Medical School classes, you can call the JHMI registrar, or you can just drop by the registrar's office, which is in the Broadway Research Building, accessible via N. Broadway St. They close early on Thursdays.

I highly recommend checking to make sure that you're actually registered; apparently last year, some people hadn't been registered for courses by midterms. You probably don't need to pester them now, but you should probably check at some point in the first few weeks of classes.

3. I doubt it's posted yet, but you can view the Room Schedule at this URL:
http://www.jhu.edu/~registr/roomsched.html
(It's accessible via http://www.jhu.edu/registrar/ --> Undergrad and Grad Students --> Course Schedule, and then it's a link in the sidebar.)

4. The NETI Summer Seminar meets on Wednesdays at 1p. The schedule can be found here:
http://neuroengineering.blogspot.com/2006/07/summer-seminar-series.html

5. On your first day of classes, you'll be given a syllabus that details what books/materials you'll need. Alternatively, if you really want to get a head start, you could email the professor who teaches that class, or the course administrator behind the class, and ask. You can also check out the course website from previous years to get a gist of the material. You can buy the books themselves in the book store, which is located in the basement of Gilman Hall on the Homewood campus. The bookstore (Matthews) at the med campus also sells a few books.

Sunday, August 13, 2006

Q: Classes / Registration

Are there suggested classes for students who are interested in neuroengineering? If not, are there some you suggest? Are we supposed to register for the neuroengineering seminar, or is that for people already in the NETI program?

Should I register soon or should I wait until orientation? Is there anything else I need to know about classes?


For registering -- have you received your registration packet in the mail already? Last year, we filled one out w/ a green sheet detailing personal info, including address, emergency contacts, etc.

If you're thinking of taking the medical school track, you should email Hong Lan and tell her -- that's the only registration that needs to be done before you get here. In general, med school classes have three to five lectures a day, from 8a to 1p. Sometimes there's a lab or discussion group meeting or journal club. The subjects are taught in blocks -- so if you take Molecules and Cells, that's done in September, and you move onto Immunology. It's kind of like having a final every couple of weeks, but you get complete immersion and then can focus on a new subject, rather than dividing your attention. It's intense, but fun.

For the Homewood/Engineering courses, registration at Hopkins is pretty laid back; you can really add/drop classes whenever. I suggest going to the first meeting of a class, and then, if you want to add it, fill out the form by add date. Quite a few people tend to register for a lot of classes, and then drop them by drop date. You do have to check periodically w/ the registrar to make sure that all of your paperwork/records are correct.

Hmm... if you're thinking of Homewood classes (biomedical engineering classes are taught through the School of Engineering), then I suggest looking at the JHU Registrar website and picking a few that pique your interest. You'll probably be given an introduction on how to register for classes during Orientation. If you're around the med campus, go to the JHMI registrar in Broadway Research Building and pick up a form. They'll also have a list of courses and course numbers. You can ask them more questions about registering.

For the alternate track/regular grad school classes: We're supposed to list classes on the JHMI form, and, if we're "cross-registering" between the med campus and Homewood campus, we need to fill out another sheet and have that signed by Hong Lan or Dr. Winslow. (Hong usually signs them. I think Alan Strong might be able to sign them, too; he takes care of a lot of our paycheck stuff, and he's in Traylor on the 7th floor.)

Some suggested Homewood classes: for Neuroengineering, it really depends on what you want to focus on. Most people recommend taking Models of the Neuron (Young) -- involves modeling and Matlab, Hodgkin & Huxley, etc. If you're going into a digital signal processing lab, or if you want to analyze neuronal firing, then taking Probability in the fall and Statistics in the spring are also recommended. Quite a few people take Applied Math for Engineering (Hilpert), which taught through the Department of Geographical and Environmental Engineering. If you're not taking the med school track, then you also should take Neuroscience and Cognition, which is basically a year-long version of the medical school "Neuroscience" course -- the med school version is more condensed, and taught in the spring.

A note about the Neuroengineering Seminar: last semester, the seminar was quite informal. This year, the students who are already part of NETI are thinking of working w/ Dr. Thakor to invite speakers, organize talks, or perhaps mesh it with our own summer seminar, which is basically a casual student-run journal club w/ free lunch. I'm not sure if I've registered for it yet, but Dr. Thakor will probably ask us for suggestions at the first meeting.

Added 8/15/06: You might actually want to head to the Registrar as soon as possible, to make sure that the paperwork's done on time.

From Tessa (PhD05 / Young Lab):
The students should take their questions about registration to Hong.

If you wait till orientation to sign up for classes you risk having a really messed up transcript. The med school registrar is archaic and they do everything by hand. It takes them forever to get registration information over to Homewood. We had people last year who signed up at orientation and weren't enrolled in classes yet at midterms. There are similar problems with adding and dropping classes.

Registration was due to the registrar by July 17th. I think you need to get the forms in ASAP so you're enrolled in the school. I know that you can defer choosing courses till September 1st, but there's some paperwork that has to be in so that you're enrolled as a full time student.

Honestly, questions about registration should be sent to Hong. She's in charge of getting all of this stuff organized. In terms of choosing classes, it depends on their backgrounds and their research interests. I'd encourage them to speak with faculty their interested in working with and/or their faculty advisors- that's what they're there for. Students are a good resource for finding out about classes and professors, but ultimately you don't want to waste your time taking classes you don't need- this is graduate school.


Phew! I hope that helps. A few of us second years, as well as quite a few first years, are taking Models of the Neuron, so we should do homework together. Woohoo for Matlab! :)